Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DXD04_04860 | Not Available | Negative | 1246819 - 1247460 | 24032.9 |
| hypothetical protein | DXD04_04865 | Not Available | Negative | 1247681 - 1249273 | 61996.7 |
| alpha-amylase | DXD04_04870 | Not Available | Positive | 1249452 - 1251305 | 70626.7 |
| glycoside hydrolase family 97 protein | DXD04_04875 | Not Available | Positive | 1251484 - 1253664 | 83317.2 |
| tonb-dependent receptor | DXD04_04880 | Not Available | Positive | 1253757 - 1256768 | 111102.0 |
| starch-binding outer membrane lipoprotein susd | DXD04_04885 | Not Available | Positive | 1256791 - 1258458 | 63108.6 |
| susf/suse family outer membrane protein | DXD04_04890 | Not Available | Positive | 1258479 - 1259642 | 42659.8 |
| lps export abc transporter atp-binding protein | DXD04_04895 | Not Available | Negative | 1259707 - 1260525 | 30881.2 |
| abc transporter permease | DXD04_04900 | Not Available | Positive | 1260665 - 1261408 | 27384.5 |
| abc transporter atp-binding protein | DXD04_04905 | Not Available | Positive | 1261405 - 1262178 | 29086.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

