Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1236596 - 1236671 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1236684 - 1236759 | Not Available |
| tetr/acrr family transcriptional regulator | DXD04_04820 | Not Available | Positive | 1236999 - 1237607 | 23441.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DXD04_04825 | Not Available | Positive | 1237624 - 1238370 | 26103.6 |
| rna pseudouridine synthase | DXD04_04830 | Not Available | Positive | 1238453 - 1239124 | 25350.7 |
| sigma-54-dependent fis family transcriptional regulator | DXD04_04835 | Not Available | Negative | 1239416 - 1240768 | 50638.5 |
| response regulator | DXD04_04840 | Not Available | Negative | 1240809 - 1243337 | 95489.0 |
| mate family efflux transporter | DXD04_04845 | Not Available | Negative | 1243341 - 1244666 | 48874.9 |
| insulinase family protein | DXD04_04850 | Not Available | Negative | 1244663 - 1245901 | 47336.8 |
| peptidylprolyl isomerase | DXD04_04855 | Not Available | Negative | 1245914 - 1246753 | 30974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

