Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DXD04_04710 | Not Available | Positive | 1222270 - 1222749 | 17485.3 |
| glycosyltransferase | DXD04_04715 | Not Available | Positive | 1222763 - 1223758 | 37491.6 |
| dna repair protein radc | DXD04_04720 | Not Available | Positive | 1223819 - 1224508 | 25741.9 |
| duf59 domain-containing protein | DXD04_04725 | Not Available | Positive | 1224594 - 1224914 | 12071.5 |
| udp-2,3-diacylglucosamine diphosphatase | DXD04_04730 | Not Available | Positive | 1224934 - 1225698 | 29886.0 |
| sugar kinase | DXD04_04735 | Not Available | Negative | 1225792 - 1226832 | 38536.9 |
| acetate kinase | DXD04_04740 | Not Available | Negative | 1226985 - 1228184 | 43561.9 |
| phosphate acetyltransferase | DXD04_04745 | Not Available | Negative | 1228281 - 1229291 | 35419.4 |
| cida/lrga family protein | DXD04_04750 | Not Available | Positive | 1229528 - 1229878 | 13068.8 |
| lrgb family protein | DXD04_04755 | Not Available | Positive | 1229859 - 1230554 | 24403.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

