Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| port family protein | DXD04_04660 | Not Available | Negative | 1208753 - 1209388 | 23987.9 |
| duf4249 domain-containing protein | DXD04_04665 | Not Available | Negative | 1209423 - 1210388 | 36737.4 |
| tonb-dependent receptor | DXD04_04670 | Not Available | Negative | 1210395 - 1212968 | 98049.0 |
| duf4974 domain-containing protein | DXD04_04675 | Not Available | Negative | 1212965 - 1213783 | 30829.2 |
| rna polymerase sigma-70 factor | DXD04_04680 | Not Available | Negative | 1213848 - 1214387 | 21293.7 |
| response regulator | DXD04_04685 | Not Available | Positive | 1214803 - 1218843 | 153085.0 |
| arylsulfatase | DXD04_04690 | Not Available | Positive | 1218874 - 1220415 | 56012.5 |
| translation initiation factor | DXD04_04695 | Not Available | Negative | 1220549 - 1220887 | 12582.1 |
| redox-sensing transcriptional repressor rex | DXD04_04700 | Not Available | Positive | 1220998 - 1221651 | 24280.6 |
| faa hydrolase family protein | DXD04_04705 | Not Available | Positive | 1221656 - 1222273 | 23263.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

