Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | DXD04_04560 | Not Available | Negative | 1183086 - 1185791 | 102806.0 |
| hypothetical protein | DXD04_04565 | Not Available | Positive | 1186504 - 1187475 | 37272.5 |
| n-acetylmuramoyl-l-alanine amidase | DXD04_04570 | Not Available | Negative | 1187550 - 1188350 | 30373.7 |
| tlpa family protein disulfide reductase | DXD04_04575 | Not Available | Negative | 1188350 - 1188886 | 19873.4 |
| xre family transcriptional regulator | DXD04_04580 | Not Available | Positive | 1189124 - 1189702 | 21464.4 |
| amp-binding protein | DXD04_04585 | Not Available | Positive | 1189726 - 1191378 | 62513.8 |
| hypothetical protein | DXD04_04590 | Not Available | Negative | 1191449 - 1192108 | 24408.8 |
| tetratricopeptide repeat protein | DXD04_04595 | Not Available | Positive | 1192254 - 1193207 | 35565.5 |
| putative c-s lyase | DXD04_04600 | Not Available | Negative | 1193290 - 1194459 | 44003.2 |
| prephenate dehydratase | DXD04_04605 | Not Available | Positive | 1194812 - 1195654 | 31712.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

