Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | DXD04_04460 | Not Available | Positive | 1159703 - 1161094 | 51963.5 |
| aminopeptidase | DXD04_04465 | Not Available | Positive | 1161135 - 1162328 | 44616.8 |
| single-stranded-dna-specific exonuclease recj | DXD04_04470 | Not Available | Positive | 1162563 - 1164284 | 64824.4 |
| recq family atp-dependent dna helicase | DXD04_04475 | Not Available | Positive | 1164291 - 1166186 | 73528.1 |
| marr family transcriptional regulator | DXD04_04480 | Not Available | Positive | 1166430 - 1166870 | 16997.7 |
| tolc family protein | DXD04_04485 | Not Available | Positive | 1166851 - 1168173 | 50716.8 |
| hlyd family secretion protein | DXD04_04490 | Not Available | Positive | 1168195 - 1169259 | 40406.3 |
| mfs transporter | DXD04_04495 | Not Available | Positive | 1169265 - 1170860 | 61386.6 |
| alpha-amlyase | DXD04_04500 | Not Available | Negative | 1170918 - 1171169 | 9466.42 |
| formate-dependent phosphoribosylglycinamide formyltransferase | DXD04_04505 | Not Available | Negative | 1171283 - 1172452 | 43012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

