Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXD04_04360 | Not Available | Negative | 1134347 - 1137646 | 122323.0 |
| duf4959 domain-containing protein | DXD04_04365 | Not Available | Negative | 1137668 - 1138918 | 45903.5 |
| rna polymerase subunit sigma-70 | DXD04_04370 | Not Available | Negative | 1138939 - 1139457 | 20384.1 |
| glycoside hydrolase | DXD04_04375 | Not Available | Negative | 1139617 - 1141011 | 52922.1 |
| hybrid sensor histidine kinase/response regulator | DXD04_04380 | Not Available | Negative | 1141239 - 1145201 | 150666.0 |
| cytochrome d ubiquinol oxidase subunit ii | DXD04_04385 | Not Available | Negative | 1145406 - 1146557 | 43393.2 |
| cytochrome ubiquinol oxidase subunit i | DXD04_04390 | Not Available | Negative | 1146591 - 1148087 | 55653.5 |
| duf4492 domain-containing protein | DXD04_04395 | Not Available | Negative | 1148129 - 1148347 | 8796.1 |
| tolc family protein | DXD04_04400 | Not Available | Positive | 1148490 - 1149833 | 50478.6 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_04405 | Not Available | Positive | 1149846 - 1151063 | 44015.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

