Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_04260 | Not Available | Negative | 1105668 - 1106885 | 46536.3 |
| 3-deoxy-8-phosphooctulonate synthase | DXD04_04265 | Not Available | Negative | 1106889 - 1107692 | 29339.8 |
| lipid kinase | DXD04_04270 | Not Available | Negative | 1107694 - 1108626 | 35287.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DXD04_04275 | Not Available | Negative | 1108633 - 1109544 | 35036.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DXD04_04280 | Not Available | Negative | 1109668 - 1110678 | 35959.2 |
| glycoside hydrolase xylanase | DXD04_04285 | Not Available | Negative | 1110912 - 1111865 | 34995.4 |
| spor domain-containing protein | DXD04_04290 | Not Available | Negative | 1111974 - 1112468 | 17736.0 |
| ytxh domain-containing protein | DXD04_04295 | Not Available | Positive | 1112663 - 1112866 | 7166.8 |
| phage holin family protein | DXD04_04300 | Not Available | Positive | 1112943 - 1113311 | 14004.0 |
| hypothetical protein | DXD04_04305 | Not Available | Positive | 1113316 - 1113585 | 10605.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

