Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter | DXD04_04210 | Not Available | Negative | 1091952 - 1093781 | 67467.2 |
| trpb-like pyridoxal phosphate-dependent enzyme | DXD04_04215 | Not Available | Positive | 1093966 - 1095330 | 50198.0 |
| aspartate 1-decarboxylase | DXD04_04220 | Not Available | Negative | 1095562 - 1095912 | 12796.6 |
| pantoate--beta-alanine ligase | DXD04_04225 | Not Available | Negative | 1095919 - 1096764 | 31719.2 |
| glycogen synthase | DXD04_04230 | Not Available | Positive | 1097022 - 1097837 | 31154.0 |
| duf4270 domain-containing protein | DXD04_04235 | Not Available | Positive | 1097864 - 1099339 | 55325.4 |
| alpha-amylase | DXD04_04240 | Not Available | Negative | 1099406 - 1100776 | 52318.6 |
| glycosyltransferase family 1 protein | DXD04_04245 | Not Available | Negative | 1100791 - 1102062 | 48443.5 |
| 4-alpha-glucanotransferase | DXD04_04250 | Not Available | Negative | 1102078 - 1104015 | 74428.8 |
| serine--trna ligase | DXD04_04255 | Not Available | Negative | 1104291 - 1105565 | 47747.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

