Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1069994 - 1070068 | Not Available |
| nad(+) synthase | DXD04_04115 | Not Available | Negative | 1070332 - 1072266 | 71427.1 |
| transcriptional repressor | DXD04_04120 | Not Available | Positive | 1072465 - 1072887 | 16116.4 |
| nadh peroxidase | DXD04_04125 | Not Available | Positive | 1072935 - 1073486 | 20795.7 |
| duf418 domain-containing protein | DXD04_04130 | Not Available | Negative | 1073794 - 1074978 | 45559.7 |
| preprotein translocase subunit secg | DXD04_04135 | Not Available | Negative | 1075101 - 1075475 | 13004.9 |
| tetratricopeptide repeat protein | DXD04_04140 | Not Available | Negative | 1075482 - 1076267 | 30485.9 |
| hypothetical protein | DXD04_04145 | Not Available | Negative | 1076279 - 1076812 | 20189.7 |
| sigma-54-dependent fis family transcriptional regulator | DXD04_04150 | Not Available | Negative | 1076799 - 1078118 | 48832.5 |
| carboxypeptidase-like regulatory domain-containing protein | DXD04_04155 | Not Available | Negative | 1078192 - 1080846 | 101924.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

