Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | DXD04_03960 | Not Available | Positive | 1034745 - 1036682 | 72515.2 |
| arabinan endo-1,5-alpha-l-arabinosidase | DXD04_03965 | Not Available | Positive | 1036771 - 1037775 | 37364.1 |
| glycoside hydrolase family 97 protein | DXD04_03970 | Not Available | Positive | 1037942 - 1039882 | 73072.7 |
| cysteine--trna ligase | DXD04_03975 | Not Available | Positive | 1039980 - 1041461 | 56143.0 |
| 6-phosphofructokinase | DXD04_03980 | Not Available | Negative | 1041677 - 1042687 | 35712.4 |
| hypothetical protein | DXD04_03985 | Not Available | Positive | 1042841 - 1044346 | 57322.8 |
| hypothetical protein | DXD04_03990 | Not Available | Positive | 1044356 - 1046281 | 73802.8 |
| duf3108 domain-containing protein | DXD04_03995 | Not Available | Positive | 1046278 - 1047093 | 31383.0 |
| ribonuclease iii | DXD04_04000 | Not Available | Negative | 1047233 - 1048252 | 38841.7 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DXD04_04005 | Not Available | Negative | 1048256 - 1049521 | 44697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

