Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | DXD04_03910 | Not Available | Positive | 1007654 - 1009927 | 86301.1 |
| glycoside hydrolase family 92 protein | DXD04_03915 | Not Available | Positive | 1009955 - 1012180 | 83233.9 |
| duf4981 domain-containing protein | DXD04_03920 | Not Available | Positive | 1012347 - 1015694 | 127295.0 |
| alpha-l-arabinofuranosidase | DXD04_03925 | Not Available | Negative | 1016245 - 1018224 | 74570.2 |
| response regulator | DXD04_03930 | Not Available | Positive | 1018463 - 1022662 | 159333.0 |
| hypothetical protein | DXD04_03935 | Not Available | Positive | 1022859 - 1024703 | 68445.6 |
| tonb-dependent receptor | DXD04_03940 | Not Available | Positive | 1024767 - 1027844 | 115641.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_03945 | Not Available | Positive | 1027862 - 1029670 | 68565.9 |
| tonb-dependent receptor | DXD04_03950 | Not Available | Positive | 1029682 - 1032885 | 120762.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_03955 | Not Available | Positive | 1032899 - 1034710 | 68727.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

