Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | DXD04_03860 | Not Available | Negative | 989559 - 992297 | 101975.0 |
| hypothetical protein | DXD04_03865 | Not Available | Positive | 992819 - 995122 | 88244.3 |
| sgnh/gdsl hydrolase family protein | DXD04_03870 | Not Available | Positive | 995145 - 995825 | 25977.1 |
| hypothetical protein | DXD04_03875 | Not Available | Positive | 995889 - 996089 | 7748.66 |
| glycoside hydrolase family 97 protein | DXD04_03880 | Not Available | Positive | 996086 - 998191 | 79784.4 |
| rna polymerase sigma-70 factor | DXD04_03885 | Not Available | Positive | 998345 - 998908 | 22196.8 |
| fecr family protein | DXD04_03890 | Not Available | Positive | 998901 - 999902 | 38368.4 |
| susc/raga family tonb-linked outer membrane protein | DXD04_03895 | Not Available | Positive | 1000094 - 1003477 | 124789.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXD04_03900 | Not Available | Positive | 1003497 - 1005263 | 67217.7 |
| glycoside hydrolase family 92 protein | DXD04_03905 | Not Available | Positive | 1005410 - 1007626 | 84056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

