Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DXD04_03705 | Not Available | Negative | 943891 - 944100 | 7703.59 |
| hypothetical protein | DXD04_03710 | Not Available | Negative | 944113 - 944352 | 9554.13 |
| duf2975 domain-containing protein | DXD04_03715 | Not Available | Negative | 944367 - 945014 | 23923.9 |
| duf2975 domain-containing protein | DXD04_03720 | Not Available | Negative | 945011 - 945640 | 23354.6 |
| cpbp family intramembrane metalloprotease | DXD04_03725 | Not Available | Negative | 945627 - 946496 | 31747.2 |
| duf3836 domain-containing protein | DXD04_03730 | Not Available | Negative | 946523 - 946843 | 12179.6 |
| rna polymerase sigma-70 factor | DXD04_03735 | Not Available | Positive | 947293 - 947901 | 24159.0 |
| fecr family protein | DXD04_03740 | Not Available | Positive | 947968 - 948972 | 39039.6 |
| susc/raga family tonb-linked outer membrane protein | DXD04_03745 | Not Available | Positive | 949203 - 952508 | 121434.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_03750 | Not Available | Positive | 952515 - 954155 | 62433.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

