Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family outer membrane lipoprotein nanu | DXD04_03655 | Not Available | Negative | 929384 - 930943 | 58961.7 |
| tonb-dependent receptor | DXD04_03660 | Not Available | Negative | 930957 - 934322 | 124251.0 |
| sialidase | DXD04_03665 | Not Available | Negative | 934665 - 936287 | 59928.8 |
| duf386 domain-containing protein | DXD04_03670 | Not Available | Negative | 936303 - 936749 | 16861.3 |
| mfs transporter | DXD04_03675 | Not Available | Negative | 936769 - 938007 | 44930.7 |
| n-acylglucosamine 2-epimerase | DXD04_03680 | Not Available | Negative | 938046 - 939230 | 45875.8 |
| n-acetylneuraminate lyase | DXD04_03685 | Not Available | Negative | 939241 - 940158 | 33882.0 |
| cyclically-permuted mutarotase family protein | DXD04_03690 | Not Available | Negative | 940250 - 941332 | 39888.1 |
| rok family transcriptional regulator | DXD04_03695 | Not Available | Positive | 941583 - 942791 | 44222.8 |
| hypothetical protein | DXD04_03700 | Not Available | Negative | 942837 - 943664 | 31175.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

