Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_03605 | Not Available | Positive | 915830 - 916384 | 21471.9 |
| nucleoside triphosphate pyrophosphohydrolase | DXD04_03610 | Not Available | Positive | 916434 - 917222 | 30418.3 |
| act domain-containing protein | DXD04_03615 | Not Available | Positive | 917366 - 917638 | 10195.7 |
| pfl family protein | DXD04_03620 | Not Available | Positive | 917656 - 919020 | 47717.2 |
| atp-dependent dna helicase | DXD04_03625 | Not Available | Positive | 919238 - 921592 | 89514.4 |
| carboxynorspermidine decarboxylase | DXD04_03630 | Not Available | Positive | 921608 - 922771 | 44654.2 |
| sialate o-acetylesterase | DXD04_03635 | Not Available | Negative | 923011 - 925086 | 78918.6 |
| sialate o-acetylesterase | DXD04_03640 | Not Available | Negative | 925088 - 925750 | 25201.3 |
| beta-n-acetylhexosaminidase | DXD04_03645 | Not Available | Negative | 925778 - 927787 | 78074.9 |
| alpha-l-fucosidase | DXD04_03650 | Not Available | Negative | 927808 - 929286 | 57738.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

