Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DXD04_03395 | Not Available | Negative | 858862 - 860040 | 45980.8 |
| amidophosphoribosyltransferase | DXD04_03400 | Not Available | Negative | 860367 - 862250 | 71768.2 |
| glutamate synthase large subunit | DXD04_03405 | Not Available | Positive | 862554 - 867086 | 166914.0 |
| glutamate synthase subunit beta | DXD04_03410 | Not Available | Positive | 867117 - 868460 | 48962.8 |
| asparagine synthase b | DXD04_03415 | Not Available | Positive | 868498 - 870168 | 62671.6 |
| diaminopimelate epimerase | DXD04_03420 | Not Available | Positive | 870183 - 870989 | 29266.2 |
| ll-diaminopimelate aminotransferase | DXD04_03425 | Not Available | Positive | 871000 - 872235 | 45357.8 |
| hypothetical protein | DXD04_03430 | Not Available | Negative | 872531 - 873238 | 27025.3 |
| hypothetical protein | DXD04_03435 | Not Available | Negative | 873379 - 874740 | 53025.1 |
| hxxee domain-containing protein | DXD04_03440 | Not Available | Negative | 875056 - 875547 | 19295.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

