Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | DXD04_03345 | Not Available | Negative | 844659 - 845717 | 40004.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DXD04_03350 | Not Available | Negative | 845806 - 846630 | 30460.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DXD04_03355 | Not Available | Negative | 846635 - 848299 | 62676.5 |
| isochorismate synthase | DXD04_03360 | Not Available | Negative | 848320 - 849450 | 42819.0 |
| paai family thioesterase | DXD04_03365 | Not Available | Negative | 849447 - 849860 | 14828.1 |
| tetratricopeptide repeat protein | DXD04_03370 | Not Available | Positive | 850176 - 852152 | 77261.1 |
| dna-binding response regulator | DXD04_03375 | Not Available | Positive | 852159 - 852917 | 29169.5 |
| hypothetical protein | DXD04_03380 | Not Available | Positive | 853064 - 854491 | 51771.6 |
| phosphodiesterase | DXD04_03385 | Not Available | Negative | 854614 - 855153 | 20117.3 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DXD04_03390 | Not Available | Negative | 855264 - 858821 | 129698.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

