Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | DXD04_03245 | Not Available | Negative | 818196 - 819569 | 50219.1 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DXD04_03250 | Not Available | Positive | 819966 - 822398 | 88808.6 |
| cofactor-independent phosphoglycerate mutase | DXD04_03255 | Not Available | Positive | 822410 - 823624 | 44584.4 |
| threonine synthase | DXD04_03260 | Not Available | Positive | 823636 - 824937 | 48112.6 |
| cytidylate kinase-like family protein | DXD04_03265 | Not Available | Negative | 825222 - 825851 | 23559.0 |
| mate family efflux transporter | DXD04_03270 | Not Available | Negative | 825921 - 827294 | 49780.8 |
| serine protease | DXD04_03275 | Not Available | Positive | 827419 - 828810 | 50860.4 |
| exodeoxyribonuclease vii large subunit | DXD04_03280 | Not Available | Positive | 828800 - 830104 | 49629.8 |
| exodeoxyribonuclease vii small subunit | DXD04_03285 | Not Available | Positive | 830106 - 830315 | 8037.58 |
| s46 family peptidase | DXD04_03290 | Not Available | Negative | 830354 - 832516 | 81587.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

