Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-beta-xylanase | DXD04_03195 | Not Available | Positive | 802717 - 803865 | 43554.1 |
| alpha-n-arabinofuranosidase | DXD04_03200 | Not Available | Positive | 803915 - 804892 | 37113.5 |
| alpha-glucuronidase | DXD04_03205 | Not Available | Positive | 804885 - 806909 | 76652.9 |
| tonb-dependent receptor | DXD04_03210 | Not Available | Negative | 807080 - 809536 | 91949.4 |
| esterase | DXD04_03215 | Not Available | Positive | 809662 - 810858 | 45478.1 |
| dna-binding response regulator | DXD04_03220 | Not Available | Negative | 810862 - 811449 | 21860.7 |
| fad-binding protein | DXD04_03225 | Not Available | Negative | 811462 - 813108 | 60849.1 |
| hypothetical protein | DXD04_03230 | Not Available | Positive | 813331 - 815058 | 62543.2 |
| hypothetical protein | DXD04_03235 | Not Available | Positive | 815075 - 816619 | 56561.9 |
| duf3868 domain-containing protein | DXD04_03240 | Not Available | Positive | 816637 - 818103 | 55479.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

