Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXD04_03095 | Not Available | Positive | 763939 - 765837 | 73166.0 |
| susc/raga family tonb-linked outer membrane protein | DXD04_03100 | Not Available | Positive | 765879 - 768725 | 107017.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_03105 | Not Available | Positive | 768751 - 770526 | 66185.8 |
| duf1735 domain-containing protein | DXD04_03110 | Not Available | Positive | 770548 - 771567 | 37908.4 |
| hypothetical protein | DXD04_03115 | Not Available | Positive | 771586 - 773844 | 83738.5 |
| glycosyhydrolase | DXD04_03120 | Not Available | Positive | 774060 - 776597 | 97470.1 |
| duf1593 domain-containing protein | DXD04_03125 | Not Available | Positive | 776661 - 777986 | 49663.4 |
| glycoside hydrolase family 43 protein | DXD04_03130 | Not Available | Negative | 778077 - 779789 | 62997.4 |
| esterase family protein | DXD04_03135 | Not Available | Positive | 780141 - 781010 | 33024.4 |
| glycoside hydrolase family 95 protein | DXD04_03140 | Not Available | Positive | 781032 - 783482 | 91459.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

