Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate/2-methylcitrate synthase | DXD04_02940 | Not Available | Positive | 734756 - 736096 | 50760.3 |
| dmt family transporter | DXD04_02945 | Not Available | Positive | 736227 - 737144 | 33396.2 |
| ygiq family radical sam protein | DXD04_02950 | Not Available | Negative | 737171 - 739024 | 70676.2 |
| hypothetical protein | DXD04_02955 | Not Available | Negative | 739034 - 739372 | 13203.7 |
| hemerythrin domain-containing protein | DXD04_02960 | Not Available | Positive | 739624 - 740304 | 26209.5 |
| dna-binding response regulator | DXD04_02965 | Not Available | Positive | 740301 - 740909 | 22765.6 |
| (fe-s)-binding protein | DXD04_02970 | Not Available | Positive | 741201 - 741941 | 27290.0 |
| lactate utilization protein | DXD04_02975 | Not Available | Positive | 741938 - 743305 | 51352.8 |
| hypothetical protein | DXD04_02980 | Not Available | Positive | 743313 - 743900 | 21456.5 |
| hypothetical protein | DXD04_02985 | Not Available | Negative | 743989 - 744183 | 7474.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

