Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | DXD04_02890 | Not Available | Negative | 720282 - 722009 | 66227.1 |
| amidohydrolase | DXD04_02895 | Not Available | Positive | 722373 - 723137 | 28573.7 |
| indolepyruvate ferredoxin oxidoreductase | DXD04_02900 | Not Available | Positive | 723150 - 724763 | 58110.9 |
| indolepyruvate oxidoreductase subunit beta | DXD04_02905 | Not Available | Positive | 724760 - 725347 | 21277.9 |
| pyridoxal phosphate-dependent aminotransferase | DXD04_02910 | Not Available | Positive | 725354 - 726670 | 48570.4 |
| phenylacetate--coa ligase family protein | DXD04_02915 | Not Available | Positive | 726713 - 728014 | 48920.2 |
| amino acid-binding protein | DXD04_02920 | Not Available | Positive | 728030 - 728446 | 15292.7 |
| sodium-translocating pyrophosphatase | DXD04_02925 | Not Available | Negative | 728503 - 730707 | 77013.8 |
| aconitate hydratase | DXD04_02930 | Not Available | Positive | 731179 - 733434 | 82023.1 |
| nadp-dependent isocitrate dehydrogenase | DXD04_02935 | Not Available | Positive | 733440 - 734702 | 46218.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

