Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mboat family protein | DXD04_02840 | Not Available | Positive | 707228 - 708730 | 58290.9 |
| Trna-arg | Not Available | Not Available | Positive | 708895 - 708966 | Not Available |
| copper homeostasis protein cutc | DXD04_02850 | Not Available | Positive | 709249 - 709998 | 27068.8 |
| transglutaminase domain-containing protein | DXD04_02855 | Not Available | Negative | 709982 - 712618 | 98148.7 |
| glucosamine-6-phosphate deaminase | DXD04_02860 | Not Available | Negative | 712735 - 714720 | 74694.0 |
| glucosamine-6-phosphate deaminase | DXD04_02865 | Not Available | Negative | 714732 - 715523 | 29012.7 |
| rok family transcriptional regulator | DXD04_02870 | Not Available | Positive | 715713 - 716918 | 44227.8 |
| had family hydrolase | DXD04_02875 | Not Available | Negative | 716984 - 717724 | 27529.1 |
| glucose-6-phosphate isomerase | DXD04_02880 | Not Available | Negative | 717849 - 719198 | 49954.8 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DXD04_02885 | Not Available | Negative | 719214 - 720209 | 37207.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

