Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-specific glutamate dehydrogenase | DXD04_02790 | Not Available | Negative | 693037 - 694371 | 49190.0 |
| hypothetical protein | DXD04_02795 | Not Available | Negative | 694540 - 694719 | 6506.48 |
| nadp-dependent malic enzyme | DXD04_02800 | Not Available | Negative | 694816 - 697101 | 84257.3 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_02805 | Not Available | Positive | 697438 - 698649 | 43398.9 |
| acrb/acrd/acrf family protein | DXD04_02810 | Not Available | Positive | 698730 - 701960 | 117387.0 |
| tolc family protein | DXD04_02815 | Not Available | Positive | 701969 - 703351 | 50271.5 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DXD04_02820 | Not Available | Positive | 703374 - 704141 | 27569.1 |
| tetr/acrr family transcriptional regulator | DXD04_02825 | Not Available | Positive | 704150 - 704791 | 25197.4 |
| hypothetical protein | DXD04_02830 | Not Available | Positive | 704931 - 706307 | 51359.7 |
| hypothetical protein | DXD04_02835 | Not Available | Positive | 706294 - 707262 | 36650.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

