Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DXD04_02740 | Not Available | Negative | 676279 - 679122 | 108302.0 |
| arac family transcriptional regulator | DXD04_02745 | Not Available | Negative | 679328 - 680173 | 32205.2 |
| tonb-dependent receptor | DXD04_02750 | Not Available | Negative | 680190 - 682616 | 91222.2 |
| duf4493 domain-containing protein | DXD04_02755 | Not Available | Positive | 682952 - 685516 | 94532.5 |
| duf4493 domain-containing protein | DXD04_02760 | Not Available | Positive | 685509 - 686732 | 43956.7 |
| duf4493 domain-containing protein | DXD04_02765 | Not Available | Positive | 686725 - 688965 | 82453.1 |
| hypothetical protein | DXD04_02770 | Not Available | Positive | 689008 - 689691 | 24957.5 |
| hypothetical protein | DXD04_02775 | Not Available | Positive | 689696 - 690538 | 31222.5 |
| hypothetical protein | DXD04_02780 | Not Available | Positive | 690541 - 692163 | 59866.8 |
| hypothetical protein | DXD04_02785 | Not Available | Positive | 692210 - 692986 | 29628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

