Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-fucosyltransferase | DXD04_02640 | Not Available | Positive | 651041 - 651913 | 33431.0 |
| glycosyltransferase family 2 protein | DXD04_02645 | Not Available | Positive | 651920 - 652900 | 38343.4 |
| hypothetical protein | DXD04_02650 | Not Available | Positive | 652915 - 654231 | 50085.8 |
| acyltransferase | DXD04_02655 | Not Available | Positive | 654215 - 654823 | 22099.2 |
| glycosyltransferase family 4 protein | DXD04_02660 | Not Available | Positive | 654840 - 655979 | 43588.1 |
| glycosyltransferase | DXD04_02665 | Not Available | Positive | 655976 - 657211 | 47772.4 |
| glycosyltransferase | DXD04_02670 | Not Available | Positive | 657411 - 658532 | 41869.4 |
| sugar transferase | DXD04_02675 | Not Available | Positive | 658571 - 659209 | 24743.5 |
| pqqd family protein | DXD04_02680 | Not Available | Positive | 659220 - 659495 | 10383.5 |
| hypothetical protein | DXD04_02685 | Not Available | Positive | 659520 - 660602 | 41623.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

