Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate synthase | DXD04_02590 | Not Available | Positive | 638130 - 641096 | 113587.0 |
| site-specific integrase | DXD04_02595 | Not Available | Positive | 641182 - 642396 | 47317.3 |
| upxy family transcription antiterminator | DXD04_02600 | Not Available | Positive | 642637 - 643188 | 21450.7 |
| atp-binding protein | DXD04_02605 | Not Available | Positive | 643278 - 644444 | 44811.7 |
| lipopolysaccharide biosynthesis protein | DXD04_02610 | Not Available | Positive | 644458 - 646014 | 58735.6 |
| glycosyltransferase family 2 protein | DXD04_02615 | Not Available | Positive | 646034 - 647008 | 38312.6 |
| polysaccharide pyruvyl transferase | DXD04_02620 | Not Available | Positive | 647018 - 647995 | 38855.3 |
| glycosyltransferase family 2 protein | DXD04_02625 | Not Available | Positive | 648123 - 649124 | 39172.1 |
| glycosyltransferase | DXD04_02630 | Not Available | Positive | 649126 - 650091 | 37700.9 |
| glycosyltransferase family 8 protein | DXD04_02635 | Not Available | Positive | 650088 - 651026 | 37380.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

