Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | DXD04_02540 | Not Available | Negative | 626947 - 627318 | 14165.1 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DXD04_02545 | Not Available | Negative | 627421 - 629967 | 96466.5 |
| nadph-dependent oxidoreductase | DXD04_02550 | Not Available | Positive | 630293 - 631033 | 28088.7 |
| chromosomal replication initiator protein dnaa | DXD04_02555 | Not Available | Negative | 631094 - 632509 | 53638.5 |
| mce family protein | DXD04_02560 | Not Available | Negative | 632941 - 633828 | 32356.2 |
| n-acetylmuramoyl-l-alanine amidase | DXD04_02565 | Not Available | Negative | 633848 - 635041 | 44343.1 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DXD04_02570 | Not Available | Positive | 635208 - 636086 | 31374.5 |
| Trna-his | Not Available | Not Available | Positive | 636174 - 636247 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 636281 - 636354 | Not Available |
| nadp-specific glutamate dehydrogenase | DXD04_02585 | Not Available | Negative | 636586 - 637923 | 48781.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

