Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | DXD04_02490 | Not Available | Negative | 617163 - 617726 | 21660.8 |
| s41 family peptidase | DXD04_02495 | Not Available | Negative | 617733 - 619385 | 61222.5 |
| cmp deaminase | DXD04_02500 | Not Available | Negative | 619391 - 619825 | 16257.6 |
| duf4847 domain-containing protein | DXD04_02505 | Not Available | Negative | 619836 - 620309 | 18204.7 |
| m3 family peptidase | DXD04_02510 | Not Available | Negative | 620318 - 622357 | 78465.7 |
| crp/fnr family transcriptional regulator | DXD04_02515 | Not Available | Negative | 622391 - 623077 | 26813.6 |
| marc family protein | DXD04_02520 | Not Available | Positive | 623261 - 623860 | 21925.0 |
| trna 2-thiouridine(34) synthase mnma | DXD04_02525 | Not Available | Positive | 623931 - 625001 | 39858.4 |
| sel1 repeat family protein | DXD04_02530 | Not Available | Positive | 625019 - 626119 | 41882.7 |
| had family hydrolase | DXD04_02535 | Not Available | Negative | 626284 - 626940 | 24599.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

