Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase t | DXD04_02440 | Not Available | Positive | 611527 - 612756 | 45169.8 |
| glycine cleavage system aminomethyltransferase gcvt | DXD04_02445 | Not Available | Positive | 612830 - 613915 | 39924.9 |
| Trna-gly | Not Available | Not Available | Positive | 613967 - 614039 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 614046 - 614131 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 614149 - 614221 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 614228 - 614313 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | DXD04_02470 | Not Available | Negative | 614364 - 614858 | 17652.1 |
| hypothetical protein | DXD04_02475 | Not Available | Negative | 614964 - 615641 | 24228.8 |
| dna replication and repair protein recf | DXD04_02480 | Not Available | Positive | 615790 - 616911 | 43408.2 |
| duf721 domain-containing protein | DXD04_02485 | Not Available | Positive | 616898 - 617188 | 11138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

