Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | DXD04_02340 | Not Available | Negative | 586922 - 587941 | 38521.1 |
| duf4348 domain-containing protein | DXD04_02345 | Not Available | Positive | 588089 - 588943 | 33721.8 |
| udp-n-acetylmuramate dehydrogenase | DXD04_02350 | Not Available | Positive | 588950 - 589975 | 38286.2 |
| mbl fold metallo-hydrolase | DXD04_02355 | Not Available | Positive | 589972 - 590769 | 29903.1 |
| glycine--trna ligase | DXD04_02360 | Not Available | Positive | 590878 - 592419 | 59486.0 |
| peptidylprolyl isomerase | DXD04_02365 | Not Available | Positive | 592433 - 593137 | 25871.3 |
| hypothetical protein | DXD04_02370 | Not Available | Positive | 593395 - 593817 | 15666.7 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_02375 | Not Available | Positive | 593899 - 595053 | 41729.4 |
| acrb/acrd/acrf family protein | DXD04_02380 | Not Available | Positive | 595066 - 598179 | 113774.0 |
| tolc family protein | DXD04_02385 | Not Available | Positive | 598176 - 599351 | 44451.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

