Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | DXD04_02290 | Not Available | Positive | 575273 - 576445 | 45647.5 |
| 2-isopropylmalate synthase | DXD04_02295 | Not Available | Positive | 576756 - 578252 | 54634.3 |
| 3-isopropylmalate dehydratase large subunit | DXD04_02300 | Not Available | Positive | 578272 - 579669 | 50711.9 |
| 3-isopropylmalate dehydratase small subunit | DXD04_02305 | Not Available | Positive | 579682 - 580278 | 22441.5 |
| 2-isopropylmalate synthase | DXD04_02310 | Not Available | Positive | 580297 - 581829 | 57410.0 |
| 3-isopropylmalate dehydrogenase | DXD04_02315 | Not Available | Positive | 581842 - 582903 | 39112.0 |
| peptide-methionine (s)-s-oxide reductase | DXD04_02320 | Not Available | Negative | 582968 - 583453 | 18608.8 |
| tetratricopeptide repeat protein | DXD04_02325 | Not Available | Positive | 583400 - 584383 | 37822.9 |
| hypothetical protein | DXD04_02330 | Not Available | Positive | 584462 - 585601 | 42757.2 |
| mfs transporter | DXD04_02335 | Not Available | Negative | 585608 - 586807 | 43681.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

