Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine dehydratase | DXD04_02240 | Not Available | Positive | 564418 - 565143 | 26869.8 |
| abc transporter atp-binding protein | DXD04_02245 | Not Available | Positive | 565150 - 565800 | 23625.7 |
| endonuclease | DXD04_02250 | Not Available | Negative | 565870 - 566739 | 32848.8 |
| gntr family transcriptional regulator | DXD04_02255 | Not Available | Positive | 566906 - 567742 | 31967.6 |
| hypothetical protein | DXD04_02260 | Not Available | Negative | 567811 - 568773 | 37769.2 |
| duf4435 domain-containing protein | DXD04_02265 | Not Available | Negative | 568817 - 569815 | 39400.6 |
| atp-binding protein | DXD04_02270 | Not Available | Negative | 569830 - 570654 | 31179.6 |
| dmt family transporter | DXD04_02275 | Not Available | Positive | 570773 - 571702 | 33560.1 |
| helicase | DXD04_02280 | Not Available | Positive | 571695 - 573581 | 72389.3 |
| alpha-l-fucosidase | DXD04_02285 | Not Available | Positive | 573853 - 575175 | 49767.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

