Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DXD04_02190 | Not Available | Positive | 542669 - 543961 | 47240.6 |
| neuraminidase | DXD04_02195 | Not Available | Positive | 544196 - 545473 | 48624.1 |
| duf2264 domain-containing protein | DXD04_02200 | Not Available | Positive | 545489 - 547798 | 89124.7 |
| beta-glucanase | DXD04_02205 | Not Available | Positive | 547921 - 549069 | 43435.6 |
| hybrid sensor histidine kinase/response regulator | DXD04_02210 | Not Available | Negative | 549142 - 553080 | 148887.0 |
| tonb-dependent receptor | DXD04_02215 | Not Available | Positive | 553547 - 556624 | 113856.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_02220 | Not Available | Positive | 556636 - 558363 | 65217.7 |
| duf2264 domain-containing protein | DXD04_02225 | Not Available | Positive | 558642 - 560630 | 76470.2 |
| aspartate-semialdehyde dehydrogenase | DXD04_02230 | Not Available | Negative | 561077 - 562087 | 37199.6 |
| cation:proton antiporter | DXD04_02235 | Not Available | Positive | 562277 - 564421 | 80417.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

