Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase | DXD04_02090 | Not Available | Positive | 520257 - 520793 | 20001.3 |
| adenylate kinase | DXD04_02095 | Not Available | Positive | 520818 - 521387 | 20777.1 |
| gtpase obge | DXD04_02100 | Not Available | Positive | 521444 - 522628 | 44341.5 |
| peptidoglycan editing factor pgef | DXD04_02105 | Not Available | Positive | 522628 - 523428 | 29993.1 |
| hypothetical protein | DXD04_02110 | Not Available | Positive | 523457 - 524119 | 24716.2 |
| m23 family peptidase | DXD04_02115 | Not Available | Positive | 524163 - 524738 | 20720.0 |
| hypothetical protein | DXD04_02120 | Not Available | Positive | 524745 - 524939 | 7248.88 |
| porin family protein | DXD04_02125 | Not Available | Positive | 525000 - 525530 | 19486.0 |
| port family protein | DXD04_02130 | Not Available | Positive | 525657 - 526295 | 22902.6 |
| hypothetical protein | DXD04_02135 | Not Available | Negative | 526292 - 527884 | 61204.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

