Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXD04_02040 | Not Available | Positive | 502249 - 504114 | 70306.8 |
| duf5017 domain-containing protein | DXD04_02045 | Not Available | Positive | 504151 - 505311 | 43271.2 |
| hypothetical protein | DXD04_02050 | Not Available | Positive | 505321 - 507381 | 75042.6 |
| hypothetical protein | DXD04_02055 | Not Available | Positive | 507394 - 508278 | 31865.2 |
| hypothetical protein | DXD04_02060 | Not Available | Positive | 508308 - 510251 | 70232.0 |
| duf4955 domain-containing protein | DXD04_02065 | Not Available | Positive | 510324 - 512603 | 83392.0 |
| duf4955 domain-containing protein | DXD04_02070 | Not Available | Positive | 512757 - 515021 | 83262.3 |
| chondroitinase | DXD04_02075 | Not Available | Positive | 515040 - 517457 | 90439.2 |
| duf4831 family protein | DXD04_02080 | Not Available | Negative | 517536 - 518573 | 38275.9 |
| nad(p)h-hydrate dehydratase | DXD04_02085 | Not Available | Negative | 518582 - 520099 | 54674.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

