Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | DXD04_01990 | Not Available | Negative | 492782 - 493492 | 25493.2 |
| mate family efflux transporter | DXD04_01995 | Not Available | Negative | 493564 - 494880 | 48736.0 |
| biotin--[acetyl-coa-carboxylase] ligase | DXD04_02000 | Not Available | Negative | 494877 - 495614 | 28119.1 |
| endonuclease | DXD04_02005 | Not Available | Negative | 495635 - 496003 | 13922.5 |
| hypothetical protein | DXD04_02010 | Not Available | Positive | 496077 - 496310 | 9452.55 |
| nucleoside deaminase | DXD04_02015 | Not Available | Positive | 496314 - 496748 | 15717.0 |
| duf4834 family protein | DXD04_02020 | Not Available | Negative | 496753 - 497040 | 11071.4 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DXD04_02025 | Not Available | Negative | 497095 - 497799 | 26036.3 |
| phosphatidylserine decarboxylase family protein | DXD04_02030 | Not Available | Negative | 497854 - 498540 | 25847.9 |
| tonb-dependent receptor | DXD04_02035 | Not Available | Positive | 499011 - 502217 | 119486.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

