Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DXD04_01940 | Not Available | Negative | 478463 - 479785 | 50476.6 |
| acrb/acrd/acrf family protein | DXD04_01945 | Not Available | Negative | 479782 - 482814 | 112329.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_01950 | Not Available | Negative | 482826 - 483902 | 39340.6 |
| hypothetical protein | DXD04_01955 | Not Available | Positive | 484145 - 484519 | 14486.9 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_01960 | Not Available | Positive | 484636 - 485784 | 43910.8 |
| acrb/acrd/acrf family protein | DXD04_01965 | Not Available | Positive | 485791 - 488931 | 115330.0 |
| tolc family protein | DXD04_01970 | Not Available | Positive | 488921 - 490363 | 53761.7 |
| ribosome small subunit-dependent gtpase a | DXD04_01975 | Not Available | Negative | 490444 - 491421 | 36545.6 |
| ribosome recycling factor | DXD04_01980 | Not Available | Negative | 491457 - 492017 | 20740.1 |
| histidine phosphatase family protein | DXD04_01985 | Not Available | Positive | 492192 - 492716 | 19673.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

