Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DXD04_01880 | Not Available | Positive | 461394 - 464570 | 118576.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_01885 | Not Available | Positive | 464576 - 466243 | 63403.1 |
| duf4091 domain-containing protein | DXD04_01890 | Not Available | Positive | 466255 - 468051 | 70697.0 |
| sulfotransferase | DXD04_01905 | Not Available | Negative | 470041 - 471147 | 43690.5 |
| sulfate adenylyltransferase subunit cysn | DXD04_01910 | Not Available | Negative | 471206 - 472711 | 56384.7 |
| sulfate adenylyltransferase subunit cysd | DXD04_01915 | Not Available | Negative | 472724 - 473635 | 35775.9 |
| adenylyl-sulfate kinase | DXD04_01920 | Not Available | Negative | 473648 - 474259 | 22652.4 |
| slc13/dass family transporter | DXD04_01925 | Not Available | Negative | 474285 - 475826 | 56689.9 |
| 3'(2'),5'-bisphosphate nucleotidase | DXD04_01930 | Not Available | Negative | 475838 - 476647 | 29967.5 |
| amino acid permease | DXD04_01935 | Not Available | Negative | 476744 - 478408 | 60186.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

