Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 448678 - 448761 | Not Available |
| fic family protein | DXD04_01820 | Not Available | Positive | 448935 - 449744 | 31009.3 |
| arac family transcriptional regulator | DXD04_01825 | Not Available | Negative | 449875 - 450747 | 33488.1 |
| mfs transporter | DXD04_01830 | Not Available | Negative | 450785 - 452425 | 62394.3 |
| hlyd family secretion protein | DXD04_01835 | Not Available | Negative | 452430 - 453524 | 40650.8 |
| tolc family protein | DXD04_01840 | Not Available | Negative | 453576 - 454901 | 50758.7 |
| sugar o-acetyltransferase | DXD04_01860 | Not Available | Positive | 457969 - 458526 | 20714.1 |
| hypothetical protein | DXD04_01865 | Not Available | Positive | 458803 - 459468 | 25498.7 |
| rna polymerase sigma-70 factor | DXD04_01870 | Not Available | Positive | 459493 - 460083 | 23095.8 |
| duf4974 domain-containing protein | DXD04_01875 | Not Available | Positive | 460149 - 461159 | 38712.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

