Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXD04_01615 | Not Available | Positive | 392266 - 393942 | 63869.3 |
| hypothetical protein | DXD04_01620 | Not Available | Positive | 393968 - 395221 | 46096.3 |
| dna mismatch repair protein | DXD04_01625 | Not Available | Positive | 395313 - 396884 | 59708.5 |
| hypothetical protein | DXD04_01630 | Not Available | Positive | 396896 - 400168 | 122866.0 |
| beta-glucosidase | DXD04_01635 | Not Available | Positive | 400200 - 402569 | 87793.0 |
| glycoside hydrolase family 3 protein | DXD04_01640 | Not Available | Positive | 402574 - 405156 | 95200.2 |
| n-acetyltransferase | DXD04_01645 | Not Available | Negative | 405240 - 405722 | 18676.3 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | DXD04_01650 | Not Available | Negative | 405724 - 406614 | 32574.0 |
| metallophosphoesterase | DXD04_01655 | Not Available | Positive | 406706 - 407542 | 30871.3 |
| nicotinate-nucleotide adenylyltransferase | DXD04_01660 | Not Available | Negative | 407543 - 408136 | 23090.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

