Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | DXD04_16565 | Not Available | Positive | 3962610 - 3963515 | 34766.7 |
| Trna-lys | Not Available | Not Available | Positive | 3963902 - 3963977 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3964009 - 3964084 | Not Available |
| port family protein | DXD04_16580 | Not Available | Negative | 3964280 - 3964846 | 20813.1 |
| is3 family transposase | DXD04_16585 | Not Available | Negative | 3965254 - 3966057 | 31610.4 |
| helix-turn-helix domain-containing protein | DXD04_16590 | Not Available | Negative | 3966078 - 3966599 | 20136.8 |
| is5 family transposase | DXD04_16595 | Not Available | Negative | 3966655 - 3967482 | 31646.3 |
| hypothetical protein | DXD04_16600 | Not Available | Positive | 3967544 - 3967966 | 17079.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

