Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | DXD04_16385 | Not Available | Positive | 3928676 - 3929896 | 46654.4 |
| gntr family transcriptional regulator | DXD04_16390 | Not Available | Negative | 3929985 - 3930365 | 14837.0 |
| hypothetical protein | DXD04_16395 | Not Available | Negative | 3930362 - 3931243 | 34068.4 |
| abc transporter atp-binding protein | DXD04_16400 | Not Available | Negative | 3931254 - 3932093 | 31246.9 |
| site-specific integrase | DXD04_16405 | Not Available | Positive | 3932373 - 3933572 | 46235.5 |
| hypothetical protein | DXD04_16410 | Not Available | Positive | 3933617 - 3934030 | 15692.8 |
| ribose-phosphate pyrophosphokinase | DXD04_16415 | Not Available | Positive | 3934208 - 3935149 | 36602.3 |
| duf2813 domain-containing protein | DXD04_16420 | Not Available | Positive | 3935344 - 3937011 | 62724.1 |
| hypothetical protein | DXD04_16425 | Not Available | Positive | 3937008 - 3938489 | 56744.9 |
| site-specific integrase | DXD04_16430 | Not Available | Positive | 3938884 - 3940116 | 47378.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

