Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | DXD04_01565 | Not Available | Positive | 375949 - 376662 | 26462.6 |
| mota/tolq/exbb proton channel family protein | DXD04_01570 | Not Available | Positive | 376666 - 377385 | 25859.0 |
| biopolymer transporter exbd | DXD04_01575 | Not Available | Positive | 377392 - 377808 | 15756.3 |
| tonb family protein | DXD04_01580 | Not Available | Positive | 377821 - 378657 | 29171.9 |
| dj-1 family protein | DXD04_01585 | Not Available | Positive | 378684 - 379232 | 19284.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DXD04_01590 | Not Available | Positive | 379232 - 379900 | 24396.4 |
| atp-dependent dna helicase recg | DXD04_01595 | Not Available | Positive | 379900 - 381999 | 80625.9 |
| glycosyl hydrolase family 35 | DXD04_01600 | Not Available | Positive | 382340 - 384640 | 86645.3 |
| response regulator | DXD04_01605 | Not Available | Negative | 384674 - 388690 | 155320.0 |
| susc/raga family tonb-linked outer membrane protein | DXD04_01610 | Not Available | Positive | 389046 - 392231 | 117379.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

