Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_16165 | Not Available | Positive | 3874338 - 3874544 | 7844.88 |
| duf1015 domain-containing protein | DXD04_16170 | Not Available | Positive | 3874531 - 3875778 | 46973.9 |
| recombinase | DXD04_16175 | Not Available | Negative | 3876153 - 3877259 | 43113.9 |
| tetr/acrr family transcriptional regulator | DXD04_16180 | Not Available | Negative | 3877393 - 3878001 | 23804.7 |
| dna methylase | DXD04_16185 | Not Available | Negative | 3878193 - 3884264 | 229200.0 |
| duf1896 family protein | DXD04_16190 | Not Available | Negative | 3884254 - 3884703 | 17043.0 |
| hypothetical protein | DXD04_16195 | Not Available | Positive | 3884766 - 3885116 | 13617.0 |
| type ia dna topoisomerase | DXD04_16200 | Not Available | Negative | 3885224 - 3887359 | 78824.7 |
| duf4099 domain-containing protein | DXD04_16205 | Not Available | Negative | 3887507 - 3889327 | 68623.9 |
| dna-binding protein | DXD04_16210 | Not Available | Negative | 3889604 - 3890020 | 16112.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

