Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_16065 | Not Available | Positive | 3851199 - 3851669 | 19020.2 |
| sodium transporter | DXD04_16070 | Not Available | Positive | 3851784 - 3852179 | 15511.6 |
| helix-turn-helix domain-containing protein | DXD04_16075 | Not Available | Positive | 3852357 - 3853223 | 34511.8 |
| hybrid sensor histidine kinase/response regulator | DXD04_16080 | Not Available | Positive | 3853311 - 3855719 | 91138.3 |
| sigma-54-dependent fis family transcriptional regulator | DXD04_16085 | Not Available | Positive | 3855707 - 3857017 | 49012.2 |
| hypothetical protein | DXD04_16090 | Not Available | Positive | 3857305 - 3857757 | 16587.2 |
| rtec protein | DXD04_16095 | Not Available | Positive | 3857977 - 3858594 | 23859.3 |
| gnat family n-acetyltransferase | DXD04_16100 | Not Available | Positive | 3858845 - 3859450 | 22962.5 |
| conjugal transfer protein trag | DXD04_16105 | Not Available | Negative | 3859629 - 3860696 | 40063.9 |
| xre family transcriptional regulator | DXD04_16110 | Not Available | Positive | 3861258 - 3861467 | 7952.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

