Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | DXD04_15965 | Not Available | Negative | 3832234 - 3833187 | 35117.9 |
| glycine c-acetyltransferase | DXD04_15970 | Not Available | Positive | 3833319 - 3834509 | 43864.7 |
| duf2075 domain-containing protein | DXD04_15975 | Not Available | Negative | 3834611 - 3836032 | 53909.4 |
| hypothetical protein | DXD04_15980 | Not Available | Positive | 3836127 - 3836813 | 25542.9 |
| duf3822 family protein | DXD04_15985 | Not Available | Positive | 3836818 - 3837642 | 31946.3 |
| methyltransferase domain-containing protein | DXD04_15990 | Not Available | Positive | 3837633 - 3838199 | 21787.1 |
| cardiolipin synthase | DXD04_15995 | Not Available | Negative | 3838159 - 3839592 | 55081.5 |
| tonb-dependent receptor | DXD04_16000 | Not Available | Negative | 3839692 - 3842577 | 107285.0 |
| hypothetical protein | DXD04_16005 | Not Available | Negative | 3842662 - 3843069 | 15486.8 |
| 3-dehydroquinate synthase | DXD04_16010 | Not Available | Positive | 3843171 - 3844232 | 39641.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

