Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3332 domain-containing protein | DXD04_15805 | Not Available | Positive | 3803983 - 3804534 | 20062.8 |
| hypothetical protein | DXD04_15810 | Not Available | Positive | 3804639 - 3805130 | 18399.2 |
| serine/threonine protein phosphatase | DXD04_15820 | Not Available | Positive | 3805742 - 3806308 | 21449.5 |
| hypothetical protein | DXD04_15825 | Not Available | Negative | 3806327 - 3807442 | 42980.5 |
| glycerate kinase | DXD04_15830 | Not Available | Negative | 3807484 - 3808557 | 38136.7 |
| duf4026 domain-containing protein | DXD04_15835 | Not Available | Negative | 3808632 - 3810344 | 65429.9 |
| rhomboid family intramembrane serine protease | DXD04_15840 | Not Available | Negative | 3810376 - 3812640 | 84382.7 |
| tetratricopeptide repeat protein | DXD04_15845 | Not Available | Positive | 3813362 - 3815875 | 96925.6 |
| toxin-antitoxin system ywqk family antitoxin | DXD04_15850 | Not Available | Positive | 3815921 - 3817018 | 42957.0 |
| duf1851 domain-containing protein | DXD04_15855 | Not Available | Positive | 3817172 - 3817762 | 22489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

