Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | DXD04_15755 | Not Available | Negative | 3789819 - 3793616 | 143944.0 |
| hypothetical protein | DXD04_15760 | Not Available | Negative | 3793765 - 3794268 | 19160.1 |
| hypothetical protein | DXD04_15765 | Not Available | Negative | 3794387 - 3794965 | 23106.8 |
| duf4627 domain-containing protein | DXD04_15770 | Not Available | Positive | 3795216 - 3795899 | 24935.4 |
| twin-arginine translocase tata/tate family subunit | DXD04_15775 | Not Available | Positive | 3796312 - 3796536 | 8380.36 |
| twin-arginine translocase subunit tatc | DXD04_15780 | Not Available | Positive | 3796542 - 3797357 | 31344.1 |
| glycoside hydrolase family 92 protein | DXD04_15785 | Not Available | Negative | 3797363 - 3799591 | 85334.0 |
| glycosidase | DXD04_15790 | Not Available | Negative | 3799661 - 3800632 | 37021.0 |
| mfs transporter | DXD04_15795 | Not Available | Negative | 3800655 - 3802022 | 51102.6 |
| mfs transporter | DXD04_15800 | Not Available | Negative | 3802244 - 3803821 | 57952.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

